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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4856621_4857961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4856621 - 4857961

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTGTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAC

U12 Branch Point Sequence:

TTGCAGGTAATG

Flanking Amino Acid:

VIGEQRGEGVNMAARCFWDA

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

63.2

0.33

63.6

30.5

Major PPT

74.5

0.55

0.9

68.4

37.4

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

39.1

-0.9

2.6

49.29

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003527

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003591

4856506 - 4863317

6812