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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4867775_4868468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4867775 - 4868468

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCCAA

U12 Branch Point Sequence:

TGGATCCCAACG

Flanking Amino Acid:

QKPPSENTAEKEEKPPVVSV

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

54.3

0.11

1.2

64.5

33.7

Major PPT

89.4

0.89

0.6

84.8

22.8

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

44.5

-0.5

1.9

49.83

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003671

4863757 - 4868687

4931