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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4888677_4889250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4888677 - 4889250

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGAG

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

GCCCAGCTAACA

Flanking Amino Acid:

PYYHMAPNSTATYTCDASGV

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

59.7

41.3

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

81.7

0.71

0.8

37.3

Minor 5ss

30.7

-2.2

3.3

38.1

46.8

Minor BPS

39.3

-0.8

2.3

47.21

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016367

4883158 - 4902955

19798