Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_4894078_4894173_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4894078 - 4894173

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACTCCT

5'SS Class:

major

3'SS Sequence:

TCTTTATCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TGCTCTTTATCC

Flanking Amino Acid:

RGWKLSYTAIGNPCPLVQPP

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

66.6

44.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

70.4

0.46

71.4

32.4

Minor 5ss

42.9

-0.8

2.9

61.1

Minor BPS

64.4

0.43

1.6

70.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016367

4883158 - 4902955

19798