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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4894322_4894600_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4894322 - 4894600

Intron Length:

279

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

CCCACCTCAAGC

Flanking Amino Acid:

EVTCPYDYIKIKAGPREFGP

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

39.3

Major BPS

64.3

0.36

65.6

31.9

Major PPT

82.8

0.74

0.9

80.7

31.3

Minor 5ss

38.7

-1.3

2.9

47.6

Minor BPS

46.4

-0.3

1.9

50.78

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015691

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016367

4883158 - 4902955

19798