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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4977029_4977336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4977029 - 4977336

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTACTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

GAGCTCTGACCT

Flanking Amino Acid:

CETCGARFVQVAHLRAHVLI

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

69.1

0.47

60.7

37.6

Major PPT

75.7

0.58

0.8

70.2

30.5

Minor 5ss

36.9

-1.5

3.2

48.2

47.9

Minor BPS

46.8

-0.1

1.7

60.12

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045335

4975587 - 4982889

7303

ENSAPLT00000016563

4975898 - 4983946

8049