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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4978611_4979687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4978611 - 4979687

Intron Length:

1077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

GTCTCATCCATC

Flanking Amino Acid:

TQSEYSDSSCENGAFFCNEC

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

78.2

37.9

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

74.7

0.56

0.8

65.5

36.1

Minor 5ss

35.2

-1.7

3.2

51.1

45.2

Minor BPS

44.3

-0.4

2.1

56.42

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045335

4975587 - 4982889

7303

ENSAPLT00000016563

4975898 - 4983946

8049