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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4981762_4982721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4981762 - 4982721

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TAACACTCATCT

Flanking Amino Acid:

RAHKTVLMACSGLFYSIFTD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

81.9

0.72

0.7

76.4

25.6

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

46.6

-0.1

1.9

65.7

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045335

4975587 - 4982889

7303

ENSAPLT00000016563

4975898 - 4983946

8049