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Intron Name: Anas_platyrhynchos_platyrhynchos_9_4982890_4983867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4982890 - 4983867

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

ATTCCCGTCCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

64.7

0.37

1.3

74.7

Major PPT

64.9

0.34

1.1

61.9

44.4

Minor 5ss

40.7

-1

2.5

42.1

44.8

Minor BPS

35.1

-1

3.7

67.25

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015868

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016563

4975898 - 4983946

8049