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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5167625_5206724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5167625 - 5206724

Intron Length:

39100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

CCATCCTAAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

74.7

37.2

Major BPS

72.7

0.57

72.1

31.1

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

34.5

-1.8

2.9

42.3

44.6

Minor BPS

53.6

0.11

1.8

61.1

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023312

5167519 - 5463093

295575