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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5289900_5308228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5289900 - 5308228

Intron Length:

18329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTCTCCTTGAAG

Flanking Amino Acid:

PMDDVTFNVQVNPGGKTLEE

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.5

40.6

Major BPS

74.6

0.61

1.4

34.5

Major PPT

78.5

0.64

79.7

26.2

Minor 5ss

32.9

-2

2.9

40.4

45.3

Minor BPS

69.7

0.48

1.5

71.83

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039621

5167519 - 5462208

294690

ENSAPLT00000023312

5167519 - 5463093

295575

ENSAPLT00000013339

5206725 - 5463093

256369