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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5391915_5417798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5391915 - 5417798

Intron Length:

25884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCAGT

5'SS Class:

major

3'SS Sequence:

CTTCTGGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TTGCACTGACCC

Flanking Amino Acid:

MENPPSDDYFGRCARCGENV

Intron Amino Acid Position:

408

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

70.5

41.3

Major BPS

61.3

0.28

52.7

34.2

Major PPT

68.6

0.42

1.1

63.8

41.7

Minor 5ss

35.8

-1.6

45.5

44.6

Minor BPS

47.5

-0.2

1.9

61.99

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039621

5167519 - 5462208

294690

ENSAPLT00000023312

5167519 - 5463093

295575

ENSAPLT00000013339

5206725 - 5463093

256369