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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5457193_5459938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5457193 - 5459938

Intron Length:

2746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACGTCCC

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TTAAGAATAACT

Flanking Amino Acid:

GNIHCIEDFHKKFAPRCSVC

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.56

1.1

63.7

41.1

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

89.7

0.89

0.6

88.3

21.4

Minor 5ss

36.1

-1.6

3.1

45.7

36.2

Minor BPS

46.5

-0.1

2.2

72.33

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039621

5167519 - 5462208

294690

ENSAPLT00000023312

5167519 - 5463093

295575

ENSAPLT00000013339

5206725 - 5463093

256369