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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5509028_5519044_F

Intron Information:

Intron Rank:

150541

Intron Class:

major

Intron Phase:

Intron Coordinates:

5509028 - 5519044

Intron Length:

10017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

CTACTTATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TAGTTTTGAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

30.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

78.4

0.64

0.9

69.9

Minor 5ss

32.2

-2

2.7

39.2

40.5

Minor BPS

49.7

-0

1.7

60.48

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020500

5508199 - 5519079

10881