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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5509028_5523211_F

Intron Information:

Intron Rank:

150540

Intron Class:

major

Intron Phase:

Intron Coordinates:

5509028 - 5523211

Intron Length:

14184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTTTTCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAA

U12 Branch Point Sequence:

TCTTCCTGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

30.8

Major BPS

74.8

0.62

39.8

Major PPT

0.56

70.2

41.3

Minor 5ss

32.2

-2

2.7

39.2

40.5

Minor BPS

79.3

0.92

1.3

84.45

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018167

5508199 - 5523575

15377