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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5523297_5533929_F

Intron Information:

Intron Rank:

150542

Intron Class:

major

Intron Phase:

Intron Coordinates:

5523297 - 5533929

Intron Length:

10633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATTAG

5'SS Class:

major

3'SS Sequence:

CTGCCATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.4

39.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

69.4

0.44

0.9

65.9

34.8

Minor 5ss

37.8

-1.4

3.1

48.8

47.4

Minor BPS

60.4

0.41

83.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034669

5523063 - 5561432

38370