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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5534032_5552863_F

Intron Information:

Intron Rank:

150543

Intron Class:

major

Intron Phase:

Intron Coordinates:

5534032 - 5552863

Intron Length:

18832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAACGT

5'SS Class:

major

3'SS Sequence:

TTGCTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

GGTTGTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

59.9

44.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

82.6

0.73

0.8

81.5

30.6

Minor 5ss

-2.1

3.5

48.5

47.1

Minor BPS

55.1

0.16

1.9

66.13

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034669

5523063 - 5561432

38370