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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5553065_5560756_F

Intron Information:

Intron Rank:

150544

Intron Class:

major

Intron Phase:

Intron Coordinates:

5553065 - 5560756

Intron Length:

7692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCAATTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

74.1

38.3

Major BPS

100

1.24

0.5

100

Major PPT

81.1

0.7

0.9

79.2

Minor 5ss

38.3

-1.3

2.8

40.3

45.6

Minor BPS

55.2

0.24

1.8

76.37

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034669

5523063 - 5561432

38370