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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5564147_5570918_F

Intron Information:

Intron Rank:

137267

Intron Class:

major

Intron Phase:

Intron Coordinates:

5564147 - 5570918

Intron Length:

6772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATGAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.7

30.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

72.8

0.51

0.9

65.6

36.2

Minor 5ss

33.3

-1.9

2.7

38.5

32.5

Minor BPS

-0.3

2.2

63.14

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026017

5564006 - 5591755

27750