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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5571066_5590745_F

Intron Information:

Intron Rank:

137268

Intron Class:

major

Intron Phase:

Intron Coordinates:

5571066 - 5590745

Intron Length:

19680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTCTTTGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

87.5

0.84

0.7

80.5

31.5

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

49.4

-0

61.33

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026017

5564006 - 5591755

27750