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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5603935_5606695_F

Intron Information:

Intron Rank:

131913

Intron Class:

major

Intron Phase:

Intron Coordinates:

5603935 - 5606695

Intron Length:

2761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TCTCTCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

79.6

29.4

Major BPS

69.2

0.48

37.1

Major PPT

78.6

0.64

0.8

76.2

32.4

Minor 5ss

41.7

-0.9

3.1

53.2

Minor BPS

49.7

-0.1

1.8

57.38

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036446

5603415 - 5649661

46247