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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5606844_5649195_F

Intron Information:

Intron Rank:

131914

Intron Class:

major

Intron Phase:

Intron Coordinates:

5606844 - 5649195

Intron Length:

42352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

74.1

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.3

0.61

0.9

77.1

37.1

Minor 5ss

34.1

-1.8

2.7

45.6

Minor BPS

59.7

0.38

1.5

72.97

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036446

5603415 - 5649661

46247