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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5673927_5691394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5673927 - 5691394

Intron Length:

17468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

LQYYPDPCIQRFVETPSHFS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

100

1.24

0.5

100

Major PPT

72.2

0.5

1.2

79.3

38.2

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027370

5673258 - 5772985

99728