Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_5691524_5692274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5691524 - 5692274

Intron Length:

751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

CCTGTTTTAACT

Flanking Amino Acid:

VIQHIWDFLEQPICSVQPID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

89.7

0.98

0.7

89.9

Major PPT

86.6

0.82

0.8

84.6

30.3

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

65.1

0.55

1.4

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027370

5673258 - 5772985

99728