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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5695855_5723948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5695855 - 5723948

Intron Length:

28094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GCTTCTGTAACA

Flanking Amino Acid:

MPRKPQYTNLGLLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

62.2

0.3

1.2

38.7

Major PPT

75.4

0.57

0.9

66.9

40.5

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

60.1

0.31

71.5

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013489

5695843 - 5772985

77143