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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5706783_5723948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5706783 - 5723948

Intron Length:

17166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCCTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

GCTTCTGTAACA

Flanking Amino Acid:

ENNAQSQYSEPQYTNLGLLN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.8

91.6

26.4

Major BPS

62.2

0.3

1.2

38.7

Major PPT

75.4

0.57

0.9

66.9

40.5

Minor 5ss

38.2

-1.3

3.4

56.9

47.4

Minor BPS

60.1

0.31

71.5

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044255

5706741 - 5762898

56158

ENSAPLT00000028633

5706741 - 5772985

66245