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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5753585_5755264_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5753585 - 5755264

Intron Length:

1680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

CTTGTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAACAAT

U12 Branch Point Sequence:

CACCAAACAATG

Flanking Amino Acid:

NHELSREFNEGQIAPPSHLI

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

1.1

64.3

47.1

Major BPS

49.4

-0

1.3

57.1

35.8

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

31.2

-2.1

3.1

31.4

42.5

Minor BPS

33.1

-1.4

1.8

29.71

33.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013489

5695843 - 5772985

77143

ENSAPLT00000044255

5706741 - 5762898

56158

ENSAPLT00000028633

5706741 - 5772985

66245

ENSAPLT00000027370

5673258 - 5772985

99728