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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5758753_5769324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5758753 - 5769324

Intron Length:

10572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTATG

5'SS Class:

major

3'SS Sequence:

CCTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCAAAT

U12 Branch Point Sequence:

CCTGTTGTAACA

Flanking Amino Acid:

QQQHQHLLQKQTSMQSQSSY

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

71.9

39.5

Major BPS

68.5

0.46

73.3

28.9

Major PPT

82.3

0.73

0.8

76.1

32.4

Minor 5ss

36.1

-1.6

2.9

48.1

41.6

Minor BPS

-0.2

2.1

57.25

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013489

5695843 - 5772985

77143

ENSAPLT00000028633

5706741 - 5772985

66245

ENSAPLT00000027370

5673258 - 5772985

99728