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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5769483_5770305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5769483 - 5770305

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGAAAC

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACAAT

U12 Branch Point Sequence:

GCCTCGGTAACA

Flanking Amino Acid:

TTIPDGMGTNIPMMGTHMAM

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

69.2

35.6

Major BPS

57.4

0.18

1.3

65.4

Major PPT

85.3

0.79

0.7

77.4

31.4

Minor 5ss

-1.6

49.6

40.5

Minor BPS

45.6

-0.3

2.6

59.27

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028633

5706741 - 5772985

66245

ENSAPLT00000027370

5673258 - 5772985

99728

ENSAPLT00000013489

5695843 - 5772985

77143