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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5771443_5772688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5771443 - 5772688

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTTAA

U12 Branch Point Sequence:

GCCCCGTTAAGC

Flanking Amino Acid:

IYQIEHYSMDDLVSLKIPEQ

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

48.9

-0

1.2

39.7

Major PPT

79.7

0.67

0.8

72.8

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

44.9

-0.4

2.3

52.09

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028633

5706741 - 5772985

66245

ENSAPLT00000027370

5673258 - 5772985

99728

ENSAPLT00000013489

5695843 - 5772985

77143