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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5778262_5789007_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5778262 - 5789007

Intron Length:

10746

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGATGAA

5'SS Class:

strong_major

3'SS Sequence:

GCCCCAGGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TGGTGCTCACTG

Flanking Amino Acid:

PLYRELERIQADAAPQAVCL

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

39.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

-0

1.1

41.8

37.4

Minor 5ss

19.6

-3.5

30.3

43.5

Minor BPS

42.7

-0.6

2.2

47.85

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013810

5778133 - 5852544

74412