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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5791294_5791801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5791294 - 5791801

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGCTC

5'SS Class:

major

3'SS Sequence:

TGGTCCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCTTCCTCATGG

Flanking Amino Acid:

THLVCRTALSGQQERRNDLS

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

64.2

41.9

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

61.9

0.27

54.4

41.4

Minor 5ss

30.4

-2.2

3.4

42.7

44.4

Minor BPS

48.2

-0.2

2.2

59.24

48.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013810

5778133 - 5852544

74412