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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5796739_5798040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5796739 - 5798040

Intron Length:

1302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCAACAT

U12 Branch Point Sequence:

CGTGCAACATCT

Flanking Amino Acid:

MDPGTIKPRKEAKALLRRHK

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

46.3

-0.2

1.3

51.3

42.7

Major PPT

84.1

0.77

0.8

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

37.9

-0.8

2.1

55.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013810

5778133 - 5852544

74412