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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5799099_5801865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5799099 - 5801865

Intron Length:

2767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CCCTTCTCAGTT

Flanking Amino Acid:

YKASLYEAVADHYMQVLACK

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

0.52

1.5

79.6

35.6

Major PPT

82.7

0.74

0.9

80.4

31.5

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

46.9

-0.1

1.8

58.82

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013236

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013810

5778133 - 5852544

74412