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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5892475_5900373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5892475 - 5900373

Intron Length:

7899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCGG

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

TTTGTGGTAACT

Flanking Amino Acid:

KVYDSLLKLESSLQATRALM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

57.3

47.4

Major BPS

78.8

0.71

67.6

40.6

Major PPT

81.2

0.7

0.8

73.5

37.1

Minor 5ss

34.9

-1.7

2.9

37.9

40.7

Minor BPS

47.8

-0

2.6

78.66

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013457

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014024

5891297 - 5900596

9300