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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5914317_5918719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5914317 - 5918719

Intron Length:

4403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAACCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTCCTCTTAACC

Flanking Amino Acid:

WMVNADDSLEVSTKCRGLWW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

73.6

0.53

0.8

67.4

33.8

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

69.7

0.6

1.3

71.01

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014228

5913958 - 5920962

7005