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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5919238_5920296_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5919238 - 5920296

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCCAC

5'SS Class:

major

3'SS Sequence:

TCCCGTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

AATTTTGTATTT

Flanking Amino Acid:

LVSGVTLLIAGLPGITGSVW

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

57.8

41.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

75.5

0.57

0.8

68.9

31.6

Minor 5ss

44.3

-0.6

2.8

59.2

45.5

Minor BPS

46.3

-0.2

2.1

66.33

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014228

5913958 - 5920962

7005