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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5920489_5920822_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5920489 - 5920822

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCTAT

U12 Branch Point Sequence:

TCTTTCCTCACA

Flanking Amino Acid:

LLTCCMYLFRETSSGRLHPA

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

0.25

1.2

58.5

Major PPT

85.1

0.79

0.7

25.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

53.5

0.1

2.1

71.21

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014228

5913958 - 5920962

7005