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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5934852_5935313_F

Intron Information:

Intron Rank:

139636

Intron Class:

major

Intron Phase:

Intron Coordinates:

5934852 - 5935313

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTCA

5'SS Class:

strong_major

3'SS Sequence:

GCATCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAACAA

U12 Branch Point Sequence:

TTCTGCTGCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.1

28.4

Major BPS

46.7

-0.2

32.2

Major PPT

67.6

0.4

0.9

38.2

Minor 5ss

39.8

-1.1

2.8

50.7

45.7

Minor BPS

46.1

-0.3

2.3

62.53

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040340

5933473 - 5935494

2022