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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5968454_5970875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5968454 - 5970875

Intron Length:

2422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ACTGTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

ATAACCAGAACC

Flanking Amino Acid:

SLGHVTAFWAMMKMVGALLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

66.4

0.37

1.1

61.4

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

51.2

0.02

1.8

65.28

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036736

5968125 - 5985266

17142