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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5970944_5980553_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5970944 - 5980553

Intron Length:

9610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

AGCTCAGGCACC

Flanking Amino Acid:

LCVIPFCSSSERCDDWGVDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

82.3

0.73

0.8

76.5

32.1

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

36.7

-1

2.4

47.51

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026597

5969584 - 6072168

102585

ENSAPLT00000041609

5963028 - 5985266

22239

ENSAPLT00000038912

5962279 - 5985266

22988

ENSAPLT00000037271

5969584 - 5985266

15683

ENSAPLT00000036736

5968125 - 5985266

17142