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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5977826_5980524_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5977826 - 5980524

Intron Length:

2699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGTTGTAT

5'SS Class:

major

3'SS Sequence:

GGAGACGTGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTCCTGGAGA

Flanking Amino Acid:

WKGLCSGTLFFLLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.27

35.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

-0.3

1.2

41.2

Minor 5ss

39.3

-1.2

3.3

51.8

47.2

Minor BPS

64.8

0.46

1.8

79.36

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027123

5977812 - 5984807

6996