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Intron Name: Anas_platyrhynchos_platyrhynchos_9_5984786_5998232_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5984786 - 5998232

Intron Length:

13447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGGGGTGC

5'SS Class:

weak_major

3'SS Sequence:

GGGCTTGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

TGGAAATTCACT

Flanking Amino Acid:

LKLPQAVWQMVLPSLGREGV

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.2

44.7

40.1

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

57.9

0.18

1.2

49.7

Minor 5ss

32.2

-2

3.5

40.5

46.1

Minor BPS

44.4

-0.3

2.2

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039973

5977377 - 5999067

21691