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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6043004_6044510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6043004 - 6044510

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

TTAAATTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAT

Flanking Amino Acid:

LIKCLEEKAKKVLSCHGQKN

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.6

35.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.1

0.39

62.8

42.5

Minor 5ss

43.2

-0.7

3.1

58.4

46.5

Minor BPS

79.5

1.2

92.62

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024888

6042359 - 6046299

3941

ENSAPLT00000014649

6042359 - 6047057

4699