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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6044628_6045750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6044628 - 6045750

Intron Length:

1123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTATTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

GTATCTCTATTC

Flanking Amino Acid:

LSSQLYRNKQLQDTLLQKEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

77.5

0.62

0.8

71.8

32.5

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

48.2

-0.1

1.9

60.6

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024888

6042359 - 6046299

3941

ENSAPLT00000014649

6042359 - 6047057

4699