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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6164816_6179117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6164816 - 6179117

Intron Length:

14302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCCG

5'SS Class:

major

3'SS Sequence:

TTTCCCTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTCCCTGTACA

Flanking Amino Acid:

DQSKLPGVKEVCRDFAVLED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

57.9

46.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.2

0.7

0.9

76.1

32.5

Minor 5ss

29.7

-2.3

3.4

38.8

46.5

Minor BPS

62.9

0.4

1.8

78.34

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037868

6164767 - 6199768

35002

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739