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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6172381_6179117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6172381 - 6179117

Intron Length:

6737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TTTCCCTGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTCCCTGTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

69.4

41.2

Major BPS

81.9

0.79

0.9

80.1

Major PPT

81.2

0.7

0.9

76.1

32.5

Minor 5ss

39.1

-1.2

57.4

40.4

Minor BPS

62.9

0.4

1.8

78.34

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389