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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6180597_6184761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6180597 - 6184761

Intron Length:

4165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTTGG

5'SS Class:

major

3'SS Sequence:

CCTTGTCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

CTGCTTATAATC

Flanking Amino Acid:

RAQIQKRQKDLERQDSEIAQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.1

59.1

42.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

79.3

0.66

0.8

76.9

31.8

Minor 5ss

37.1

-1.5

2.9

50.1

46.1

Minor BPS

48.2

-0.1

1.6

55.54

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739