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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6184853_6187285_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6184853 - 6187285

Intron Length:

2433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCAATCTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTTTCTTCAATC

Flanking Amino Acid:

QRRRQEEKDEDIARLLQQKE

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

71.9

0.49

0.9

66.3

35.3

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

0.73

1.4

82.42

31.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002

ENSAPLT00000029415

6164767 - 6199768

35002

ENSAPLT00000014842

6164767 - 6201505

36739