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Intron Name: Anas_platyrhynchos_platyrhynchos_9_6187404_6190904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6187404 - 6190904

Intron Length:

3501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CACTAACCACCT

Flanking Amino Acid:

YEDSYYSENGEHRRGDPGEQ

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

21.5

Major BPS

64.5

0.36

65.2

28.2

Major PPT

69.4

0.44

0.9

67.5

37.8

Minor 5ss

42.8

-0.8

2.8

59.5

Minor BPS

34.3

-1.1

2.1

48.39

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039315

6172380 - 6199768

27389

ENSAPLT00000037868

6164767 - 6199768

35002